Available graphs

RNA-KG
The entire RNA-KG. This KG is useful to predict relationships involving the different kinds of RNAs.
PKT-KG
The PheKnowLator-built benchmark KG about molecular mechanisms behind human diseases. This KG is useful to predict relationships involving bio-entities such as genes, phenotypes, chemicals, and diseases.
RNA+PKT-KG
This KG merges RNA-KG and PKT-KG.
miRNAdiseaseSO
A view of RNA-KG focused on interactions involving miRNAs, phenotypes, diseases, and genes. This view is useful to predict miRNA-disease, miRNA-phenotype, and miRNA-gene relationships.
piRNAdiseaseGO
A view of RNA-KG focused on interactions involving lncRNAs, piRNAs, phenotypes, variants (SNPs), miRNAs, GO terms, and genes. This view is useful to predict piRNA-disease and piRNA-phenotype relationships.
chemicalDisease
A view of RNA-KG focused on interactions involving miRNAs, lncRNAs, diseases, genes, chemicals, and phenotypes. This view is useful to predict miRNA-disease, lncRNA-disease, gene-disease, miRNA-chemical, lncRNA-chemical, chemical-disease, miRNA-phenotype, lncRNA-phenotype, gene-phenotype, and chemical-phenotype relationships.

Model options

Homogeneous

Heterogeneous

Directed

Undirected

PyG

Grape

GNN based

RW based

Available models for current selection

Selected prediction models for new task